Plant GARDEN
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TOP > About the Species(Nicotiana tabacum var. TN90) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Nicotiana tabacum

CDS Sequence

CDS ID

lcl|NW_015816904.1_cds_XP_016499009.1_12978
CDS Infomation

[gene=LOC107817655] [db_xref=GeneID:107817655] [protein=protein NSP-INTERACTING KINASE 2-like] [protein_id=XP_016499009.1] [location=join(135321..135423,135546..135675,135773..135844,135948..136091,136472..136543,136640..136699,136807..136907,137098..137247,137630..137971,138753..139132,139514..139834)] [gbkey=CDS]
Sequence

ATGGAAACAAGAAGTATAAATGGTGTTTTTGGTTTTTTGGTCTTATTGAGTTTCTTAGTT
TATTCCAATGCTGTGCTTACTCCAGCTGGTGTTAATTATGAAGTGCAAGCGTTAATGGAG
ATCAAGAATTCATTACATGATCCACATAATGTTTTGAATTGGGATGAAAGTTCTGTTGAT
CCATGTAGTTGGAATATGATCACTTGTTCAAGTGATAAATTTGTCACTGGCTTGGCAAGT
CCAAGCCAAAGTTTGTCTGGAAAAATATCACCATTTATTCACAACTTGACTCACTTGGAG
TTACTGCTTCTGCAAAGTAATAATATATCAGGACTAATTCCAACTGAACTTGGAATACTT
CAGAAACTTAAAACAATTGATCTTTCTGACAATCAGCTCACTGGCCAAATTCCTCCCTCT
TTAGCTCAATTGAAAAGCCTCCAATACTTGAGACTAAATAACAATAGTCTTAGTGGAGCT
GTTCCTTTGGAGTTGTCTAATATGACTCAGCTGACTCTACTAGACTTGTCTTTTAACAAT
CTGAGTGGTCCTGTGCCAAGGCTTCTGGCTAAAACATTCAACATTATGGGAAATCCTATT
ATATGTGCAACTGGGAAAGAACCAGAATGCAATGGAACAACATCCTTGCCACTGCCCTTA
ATCACTTTGAACAACTCACAAAATGCTCAGCATTTTGGAAGATCTAAAACTCACAAAGTT
GCCTTAGCCTTTGGGACAAGTCTTGGATGTATCTGCCTACTAATTATTGGGTTTGGTTTC
TTTCTGTGGTGGAGACAAAAGCACAACAAGCAAATTTTCTTTGATACTAATGAACAACAT
CATGAACAAGTGTGCCTGGGAAACTTGAGGAGGTTTCAATTTAGGGAACTTCAAGCTGCT
ACACACAACTTCAGCAACAAGAACATACTGGGAAAAGGCGGTTTTGGTAATGTATACAAA
GGTTCTCTTCATGATGGAACAATTGTTGCAGTGAAAAGGCTCAAAGATGGAAATGCAATT
GGAGGAGACAGGCAATTTCAAACTGAAGTTGAATTGATCAGCTTGGCAGTGCACCGAAAT
CTCCTCCGTTTGTATGGATTTTGCATGACACCAACTGAAAGGCTTCTTGTTTACCCTTAC
ATGTCTAATGGAAGTGTTGCTTCGCGCCTTAAAGCCAAGCCACCATTAAACTGGAGTACA
AGAAAAAGAATTGCATTGGGAGCGGCGAGGGGTTTGCTATATCTACATGAGCAGTGTGAT
CCCAAGATTATTCACAGGGATGTGAAGGCTGCAAACATATTGCTCGACGATTACTGTGAG
GCTGTTGTGGGAGATTTTGGATTGGCAAAGCTATTGGATCATCGCGATTCACATGTCACA
ACTGCAGTTAGGGGAACTGTAGGACATATAGCCCCTGAGTATCTCTCTACAGGACAGTCC
TCTGATAAAACAGATGTTTTCGGGTTTGGGATTCTACTTCTAGAGTTGATATCTGGCCAA
AGAGCTCTTGAATTTGGTAAAGCGGCCAATCAGAAAGGCGCTATGCTCGATTGGGTAAAG
AAGATTCAACAAGAGAAAAAGCTTGACTTGCTGGTGAACAAGGACTTAAAAGACAACTAT
GATCGGATTGAGGTCGAGGAAATGGTACAAGTAGCTTTAATATGCACTCAATATCACCCA
AGTCACAGACCAAAAATGTCAGAAGTTGTAAGAATGCTAGAAGGAGATGGACTTGCTGAG
AAATGGGAAGCTTCTCAAAAGGCAGAATCAACCAGATGTAGAGCTAATGAGTTCTCCTCT
TCAGAAAGATATTCTGATCTTACTGATGATTCTTCATTGCTTGTCCAAGCAATGGAACTA
TCAGGGCCAAGGTGA

Peptide Sequence

PEP ID

XP_016499009.1
PEP Infomation

PREDICTED: protein NSP-INTERACTING KINASE 2-like [Nicotiana tabacum]
Sequence

METRSINGVFGFLVLLSFLVYSNAVLTPAGVNYEVQALMEIKNSLHDPHNVLNWDESSVD
PCSWNMITCSSDKFVTGLASPSQSLSGKISPFIHNLTHLELLLLQSNNISGLIPTELGIL
QKLKTIDLSDNQLTGQIPPSLAQLKSLQYLRLNNNSLSGAVPLELSNMTQLTLLDLSFNN
LSGPVPRLLAKTFNIMGNPIICATGKEPECNGTTSLPLPLITLNNSQNAQHFGRSKTHKV
ALAFGTSLGCICLLIIGFGFFLWWRQKHNKQIFFDTNEQHHEQVCLGNLRRFQFRELQAA
THNFSNKNILGKGGFGNVYKGSLHDGTIVAVKRLKDGNAIGGDRQFQTEVELISLAVHRN
LLRLYGFCMTPTERLLVYPYMSNGSVASRLKAKPPLNWSTRKRIALGAARGLLYLHEQCD
PKIIHRDVKAANILLDDYCEAVVGDFGLAKLLDHRDSHVTTAVRGTVGHIAPEYLSTGQS
SDKTDVFGFGILLLELISGQRALEFGKAANQKGAMLDWVKKIQQEKKLDLLVNKDLKDNY
DRIEVEEMVQVALICTQYHPSHRPKMSEVVRMLEGDGLAEKWEASQKAESTRCRANEFSS
SERYSDLTDDSSLLVQAMELSGPR

Transcript Sequence

Gene sequence data has not been registered.